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Pumpkin Pie Thumbprint Cookies

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Celebrating the best of Fall with these super cute Pumpkin Pie Thumbprint Cookies! A super simple, soft shortbread cookie made with a little dip in the middle to be filled with the best-ever homemade pumpkin pie filling. It tastes just like the classic dessert, but in cookie form! The best part? The pie filling is only 6 ingredients, perfectly sweet, and deliciously spiced. Every bite is sure to leave you wanting more! Fun to bake, delicious to eat, and oh so cute, they’re the perfect cookie to bake this holiday season, to enjoy with friends and family, or give as a great homemade gift!

close up of pumpkin pie cookie with more cookies around and a star anise pod.

About The Recipe

I love pumpkin pie as much as the next person. I really do! It can be so much fun to make and even better to eat. Though, sometimes, we’re looking for something just a little quicker and easier to make, you know?

Which is where these cookies come in!

I mean, cookie season is pretty much here, so why not combine two of the best desserts to create the ultimate Fall treat?

Our original idea for these cookies was a sugar cookie base. But when we were testing the recipe, it was far too sweet! I love sweet things, but it was just too much. So, it was kind of back to the drawing board.

We knew we wanted a thumbprint cookie, but we weren’t sure the best way to achieve this without the cookie just being cloyingly sweet.

My mom and I must’ve talked about a hundred different cookies over the last few days! Finally, we landed on shortbread. We did a shortbread cookie base for our Pumpkin Pie Bars a while back. Perfect! This one’s structured a little different. It’s buttery and soft, but not too sweet. The perfect cookie!

I mean, I could not be happier with these cookies. Best of all? They’re SO quick to mix up and pretty much no-fail.

close up of pumpkin pie thumbprint cookie with pipe of whipped cream.

I was gonna leave these cookies undecorated for the pictures, as they’re stunning on their own, but I couldn’t help myself! I love pumpkin pie with some whipped cream. It’s one of my favorite combos.

So, I quickly whipped up a batch of Chantilly Cream, piped some on a few of the cookies, then used cinnamon chunks as the stems. It’s not a necessary step and the cinnamon chunks need to be removed before eating, but it’s just so darn cute.

If I’m being honest, these pumpkin pie thumbprint cookies might just be better than pumpkin pie! They’re individually sized, full of flavor, and so easy to make.

If you love pumpkin pie, you will definitely love these cookies!

Reasons You Will Love These Pumpkin Pie Thumbprint Cookies

  • So much easier to make than pumpkin pie!
  • Like eating mini pumpkin pies.
  • No refrigeration time!!
  • Perfect for gift giving or enjoying as a sweet treat during Thanksgiving.
  • Ready in 35 minutes or LESS!
close up of pumpkin pie cookie with bite missing.

Equipment Needed

Ingredients

(Full ingredient amounts and instructions can be found in the recipe card at the bottom of the post)

For The Filling:

  • Pumpkin Purée – makes this filling more flavorful, deeper in color, and silky smooth.
  • Brown Sugar – adds sweetness and a bit of a molasses flavor.
  • Egg Yolk – binds the filling together and thickens it.
  • Evaporated Milk – provides a rich and creamy flavor.
  • Pumpkin Pie Spice – The essential blend of spices that makes pumpkin pie so irresistible.
  • Salt – enhances the flavor of the filling.
salt, evaporated milk, brown sugar, pumpkin puree, egg, and pumpkin spice on marble surface.

For The Cookie:

  • Granulated Sugar – promotes browning and keeps the cookie from spreading too much.
  • Unsalted Butter – adds moisture and flavor and allows you to control the level of salt.
  • Large Egg – acts as a binder and helps to make the cookies fluffy and tender.
  • Vanilla Extract – adds the perfect undertone to enhance the flavor of the cookie.
  • All-Purpose Flour – has just the right amount of protein for these cookies. It adds strength to the dough by absorbing liquid and forming gluten.
  • Salt – enhances the flavor.
  • Baking Soda – contributes to the rise and structure, as well as the browning of these cookies.
flour, sugar, butter, salt, baking soda, vanilla, and egg on marble surface.

How To Make Pumpkin Pie Thumbprint Cookies

Step 1: Make the filling

In a small bowl, combine all ingredients for the filling. Whisk until well combined. Set aside.

Step 2: Make cookie dough

With an electric mixer, beat butter and sugar until light and fluffy, about 2-3 minutes.

Add egg and vanilla. Beat until combined.

Add flour, salt, and baking soda. Stir only to combine.

Step 3: Shape

Use a 1½ Tablespoon scoop to portion dough onto prepared pans. Roll each cookie dough ball between the palms of your hands until smooth.

Use back of scoop to make a deep indentation in top of dough balls.

Step 4: Fill and bake

Fill each indentation with 1 Tablespoon filling. Bake for 14 minutes, or until done.

Fresh or Canned Pumpkin?

For this recipe, it’s best to use canned pumpkin purée! It’s silkier in texture and brighter in color than fresh pumpkin.

How To Store

These cookies are best eaten the day they’re made; but if you need to store them, you can keep them in the fridge for 2-3 days, or in the freezer for up to 2 months! Just remember that the pumpkin pie filling is still soft, so do not stack these cookies.

To freeze, the best way is to place them on a lined sheet pan and freeze until completely frozen. After that, place the cookies in a freezer safe zip-top bag and freeze for up to 2 months.

Substitutions

  • Pre-made pumpkin pie filling can be used to fill these cookies instead of the homemade filling. Just remember that baking times may vary slightly.
  • If you do not have pumpkin pie spice for the filling, you can use cinnamon.
close up of pumpkin pie cookie with more cookies around and a star anise pod.

Expert Tips

  • Make sure all of your ingredients are room temperature!
  • If you are making the filling, be sure you have pumpkin purée and not pumpkin pie filling.
  • Be careful to not over-mix the cookie dough!
  • Use the back of a cookie scoop to make the indentation into each cookie. Just be careful to not go all the way down to the pan. About ½ to ¾’s of the way through the cookie should do.
  • Since it won’t be exact for each cookie, be careful to not overfill! Fill each cookie just to the top. If it’s filled anymore, it will make a mess!
  • Depending on how your oven bakes, if baking multiple pans at a time, be sure to check on the cookies at about 8-10 minutes into the bake time.

When you make this Pumpkin Pie Thumbprint Cookies, leave a comment down below! We love hearing from you and answering any questions you might have! Also, be sure to tag us on social media and hashtag it #BakersTable.

eight pumpkin cokoies on parchment paper with two stacked behind and white flowers around and star anise pod.
5 from 2 votes

Pumpkin Pie Thumbprint Cookies

Soft, perfectly sweet, and oh so delicious! These Pumpkin Pie Thumbprint Cookies are just like the classic dessert, but maybe even a little better. Simple to make, super cute, and ready in 35 minutes or LESS!
Prep Time: 20 minutes
Cook Time: 14 minutes
Total Time: 34 minutes
Servings: 18

Ingredients
 

Filling

Cookie

  • cup granulated sugar
  • ¾ cup unsalted butter, room temperature
  • 1 large egg, room temperature
  • teaspoon vanilla extract
  • cups all purpose flour*
  • teaspoon salt
  • teaspoon baking soda

Instructions
 

Filling

  • In a small bowl, combine all ingredients.
  • Whisk until well combined. Set aside.

Cookie

  • Heat oven to 375℉.
  • Line 2 sheet pans with parchment paper. Set aside.
  • With an electric mixer, beat butter and sugar until light and fluffy, about 2-3 minutes.
  • Add egg and vanilla.
  • Beat until combined.
  • Add flour, salt, and baking soda.
  • Stir only to combine.
  • Use a 1½ Tablespoon scoop to portion dough onto prepared pans.
  • Roll each cookie dough ball between the palms of your hands until smooth.
  • Use back of scoop to make a deep indentation in top of dough balls.
  • Fill each indentation with 1 Tablespoon filling.
  • Bake for 14 minutes, or until done.

Notes + Tips!

*This recipe was written using an average of the dip and sweep method for measuring flour and the spoon and level method. If you are using a scale, you will need to add 3/4 oz or 22 g  to the measurement for each cup of flour.
Substitutions:
  • Pre-made pumpkin pie filling may be used to fill these cookies instead of the homemade filling.  Remember that baking times may vary slightly.
  • If you do not have pumpkin pie spice for the filling, you can use cinnamon.
Expert Tips:
  • Make sure all of your ingredients are room temperature!
  • If you are making the filling, be sure you have pumpkin purée and not pumpkin pie filling.
  • Be careful to not over-mix the cookie dough!
  • Use the back of a cookie scoop to make the indentation into each cookie. Just be careful to not go all the way down to the pan. About ½ to ¾ of the way through the cookie should do.
  • Since it won’t be exact for each cookie, be careful to not overfill! Fill each cookie just to the top. If it’s filled anymore, it will make a mess!
  • If baking multiple pans at a time, be sure to check on the cookies at about 8-10 minutes into the bake time.

Nutrition

Serving: 1cookie | Calories: 151kcal | Carbohydrates: 17g | Protein: 2g | Fat: 9g | Saturated Fat: 5g | Polyunsaturated Fat: 0.4g | Monounsaturated Fat: 2g | Trans Fat: 0.3g | Cholesterol: 42mg | Sodium: 81mg | Potassium: 42mg | Fiber: 0.5g | Sugar: 7g | Vitamin A: 978IU | Vitamin C: 0.3mg | Calcium: 18mg | Iron: 1mg

Nutritional information is only an estimate. The accuracy of the nutritional information for any recipe on this site is not guaranteed.

When you make this recipe, remember to tag @bakerstble or hashtag it #BakersTable!

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